4DXpress - Expression Database in 4D | Tool name | 4DXpress - Expression Database in 4D |
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| URL | http://4dx.embl.de/4DXpress |
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| Important features | A platform to query and compare gene expression data for the developmental stages of the major model animals, including zebrafish, drosophila, medaka and mouse. It contains gene expression data acquired through whole mount in situ hybridization. The database can be queried with anatomy ontology based expression annotations across species. It also provides orthologs for the query gene. |
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| Citations | Haudry Y, Berube H, Letunic I, Weeber PD, Gagneur J, Girardot C, Kapushesky M, Arendt D, Bork P, Brazma A, Furlong EE, Wittbrodt J, Henrich T. 4DXpress: a database for cross-species expression pattern comparisons. Nucleic Acids Res. 2008 Jan;36(Database issue):D847-53. Epub 2007 Oct 4. PubMed PMID: 17916571; PubMed Central PMCID: PMC2238840. |
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| Year of publication | 2007 |
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| Rank by usage frequency | 100 |
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| Comments | Note as per the resource: "All data is public and searchable without login. Only data which is in the annotation pipeline is not accessible, but will be released, when annotation is complete". |
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| Function | Proteomic, Other technique(s), Multiple techniques, Human, Mouse, Other species, Multiple species |
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| Category | Online, Free |
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| Working status | Functional |
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| Other features | |
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| Other citations | Not available |
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